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> > | Computer Generated Holography (CGH)Kyoji Matsushima and Sumio NakaharaApplied Optics, Vol. 48, Issue 34, pp. H54-H63 doi:10.1364/AO.48.000H54 http://www.opticsinfobase.org/abstract.cfm?URI=ao-48-34-H54 ![]()
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Marc Levoy's reading list on Holographic IlluminationHolographic photolysis of caged neurotransmittersLutz C., Otis T.S., DeSars V., Charpak S., DiGregorio D.A., Emiliani V.,Nature Methods, Vol. 5, No. 9, September 2008. Marc's comments:Uses an LC-SLM to modulate the phase of a laser beam. Figure 1 shows several phase masks and the resulting 3D intensity patterns. Cites other papers by this group (optics05, japanphysics04) for construction of the phase masks. One pattern is a collection of 0.4-micron spots; another is a collection of large spots. In the latter, the spots' edges are fairly sharp, but their interior intensities are noisy (15% variability). Each pattern is generated using a single phase mask, without scanning. Figure 2 shows a phase mask computed to generate a pattern observed through the microscope. This pattern would appear at the objective focal plane. Figure 3 shows that the axial extent of these spots (depth of focus) is much tighter than a Gaussian beam (i.e. simple laser beam). This makes sense, because a phase mask utilizes the entire aperture plane, while a Gaussian beam considerably underfills the aperture (i.e. it is paraxial). Question: how does this depth of focus compare to a refractively focused spot? Discussion points out that DLPs would provide more time control than LC-SLMs, kHz vrs 60 Hz, but when generating a collection of spots, efficiency is much higher using phase masks than DLPs, ~50% vrs 10%. Scanning using accousto-optical deflectors (AODs) or galvanometers are an alternative, but scanning rates are limited. Mentions that phase masks can simultaneously correct for optical aberrations. Ends by mentioning that 3D patterning has many other applications in fluorescence microscopy. Extraordinary paper, recommended by Rudolf Oldenbourg and Ramin Pashaie (in Karl Diesseroth's lab). Terse but well writen, with highly informative figures, each one a collage of several images and related illustrations. Includes a detailed description of the 3D pattern -> 2D phase mask algorithm as supplemental material. The forward and back propagation steps are Fourier transforms, as expected. They report that 5-8 iterations usually suffices, taking about 1 second on a PC. (This is only for a single plane. Their genetic algorithm for computing multiple planes presumably takes longer, perhaps more like the dozens or hundreds of iterations reported in Piestun ieee02.) Cites Gerchberg and Saxton, 1972, Fienup 1982, and other classic papers.Wave front engineering for microscopy of living cellsEmiliani V., Cojoc D., Ferrari E., Garbin V., Durieux C., Coppey-Moisan M., Fabrizio E.D.,http://www.opticsinfobase.org/oe/abstract.cfm?URI=OPEX-13-5-1395 ![]() Marc's comments:An LC-SLM is used to modulate the phase of a laser beam to create focused points at any position in 3D. This capability is used to create optical tweezers whose position is held constant in the specimen despite axial motion of the objective during 3D confocal scanning.Multiple Optical Trapping by Means of Diffractive Optical ElementsCojoc D., Emiliani V., Ferrari E., Malureanu R., Cabrini S., Proietti R.Z., Fabrizio E.D.,Japanese J. Appl. Phys., Vol. 43, 2004, pp. 3910-3915. http://jjap.ipap.jp/link?JJAP/43/3910 ![]() Marc's comments:Describes a genetic algorithm to solve for a phase-only DOE given a desired 3D intensity distribution. Sub-algorithm to achieve a desired distribution on a single focal plane looks alot like Piestun's (ieee02) first method. However, the two literatures seem entirely disjoint, having no cited papers in common! (Some share citations of the Gerchberg-Saxton algorithm, which was 1972.) DOE is implemented using an LC-SLM. Clearly written article, which also explains how the LC-SLM works, and shows an example phase mask. This capability is used to create optical tweezers that can trap multiple cells and hold them in a fixed position relative to the specimen despite axial motion of the stage (performed by hand).Synthesis of Three-Dimensional Light Fields and Applications,Piestun R., Shamir J.Proc. IEEE, Vol. 90, No. 2, February 2002. http://ieeexplore.ieee.org/xpls/abs_all.jsp?isnumber=21333&arnumber=989871&count=10&index=4 ![]() Marc's comments:Presents theory on what kind of light fields in 3D can be generated using a propagating coherent 2D wavefront. The answer is a sphere whose radius is determined by the light's wavelength, the Ewald sphere. For a finite aperture, this becomes a spherical cap. If you don't care about phase in the generated field, it becomes a doughnut of twice the bandwidth (see figure 5). Unfortunately, the author is a poor explainer, so the paper gives little insight. Sheppard's papers (e.g. josa94) explain this same idea for imaging, and do it better. See also Gustafsson's papers. A more thorough explanation by Piestun of the limits on what can be generated can be found in his josa96 paper (reference [14]). The paper also surveys ways to create light fields, and he describes several methods for generating any light field in 3D (that is generatable). The method he favors is a simple optimization that alternates between projecting the current solution onto the light field in 3D (what the author calls 3D wave fields) you wish to generate and projecting it onto the "diffraction propagator" (equation 15), which constricts you to physically generatable wave fields. His original paper on this method appears to be Piestun optics94. Regarding distinguishing those light fields in 3D (what the author calls 3D wave fields) that can be generated from those that cannot, page 228 lists a few constraints, but fails to give a comprehensive intuition. The paper continues by describing the ability (using these methods) of generating non-diffracting beams (see Durnin josa87), dark beams (narrow black cores that propagate for a long time without defocusing), arbitrary curves of light in 3D, arbitrary patterns with extended depth of field (I looked at reference [107]; it doesn't give the form of the DOE), and multiple planar patterns, each one in focus at a different depth (figure 20). Finally, his paper completely omits lenslet/microlens arrays, and he doesn't cite Lippman or Ives! He attended the UNCC/OSA Computational Imaging and Superresolution workshop in June 2008 with me, so he now knows. Cite this paper in your first paper on creating light fields. (Done, J. Micr., 2009.) By the way, reading this paper you would think that Piestun invented the idea of computing DOEs that implement particular 3D wave fields. (See for example the top of page 226.) However, there appears to be parallel developments in microscopy. See for example Cojoc et al.'s japanphysics04 paper. There are almost no citations in common that address the fundamental method until one goes back to Gerchberg-Saxton 1972.Control of wave-front propagation with diffractive elements,Piestun R., Shamir J.,Optics Letters, Vol. 19, No. 11, June 1, 1994. http://www.opticsinfobase.org/abstract.cfm?URI=ol-19-11-771 ![]() Marc's comments:The original paper introducing Piestun's method; see his ieee02 paper. For a concrete example of non-diffracting beams, see cited Durnin josa87.pdf.Wave fields in three dimensions: analysis and synthesis,Piestun R., Spektor B., Shamir J.J. Opt. Soc. Am. A, Vol. 13, No. 9, September 1996, p. 1837. http://www.opticsinfobase.org/abstract.cfm?URI=josaa-13-9-1837 ![]() Marc's comments:Actually shows an example diffractive optical element (DOE) that generates a particular 3D wave field. Also contains a fairly thorough explanation of the limits on the wave fields that can be generated, although without the figures that can be found in his ieee02 paper. In particular, we are reminded that one can specify only 2D worth of information about the 3D wave field, corresponding to a spherical cap in Fourier space, or equivalently to the DOE itself, which is of finite size and limited spatial resolution. The same is true, of course, of LFI, which we generate using a 2D DLP. The discussion of degrees of freedom (page 1842) is also interesting, including an example of how much axial control can be expected from a DOE with a particular aperture and resolution.Lukas' comments:
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> > | Quasi light fields: extending the light field to coherent radiationAnthony Accardi and Gregory WornellJOSA A, Vol. 26, Issue 9, pp. 2055-2066 http://www.opticsinfobase.org/abstract.cfm?URI=josaa-26-9-2055 ![]()
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Digital Holography, generalDigital recording and numerical reconstruction of holograms |
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< < | Generalizing, optimizing, and inventing numerical algorithms for thefractional Fourier, Fresnel, and linear canonical transforms | |||||||
> > | Generalizing, optimizing, and inventing numerical algorithms for the fractional Fourier, Fresnel, and linear canonical transforms | |||||||
Bryan M. Hennelly and John T. Sheridan JOSA A, Vol. 22, Issue 5, pp. 917-927 doi:10.1364/JOSAA.22.000917 Forward References: n | ||||||||
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> > | On the Existence of Discrete Wigner DistributionsJC O'Neill, P Flandrin, WJ WilliamsIEEE Signal Processing Letters, 1999 http://perso.ens-lyon.fr/patrick.flandrin/IEEE_SPL1999.pdf ![]()
Ambiguity function and Wigner distribution function applied to partially coherent imageryBrenner, K.-H.; Ojeda-Castaņeda, J.Optica acta (Journal of Modern Optics) 1984, vol. 31, no2, pp. 213-233 (16 ref.) http://www.informaworld.com/index/DJQTY58T494W9PAD.pdf ![]()
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Scalar Wave Optics, Time-Frequency Analysis, Wigner transform (Lukas)Wigner and the LCTSpace-bandwidth product of optical signals and systemsAuthors Adolf W. Lohmann, Rainer G. Dorsch, David Mendlovic, Zeev Zalevsky, and Carlos FerreiraJournal Year JOSA A, Vol. 13, Issue 3, pp. 470-473 doi:10.1364/JOSAA.13.000470 Forward References: n link http://www.opticsinfobase.org/abstract.cfm?URI=josaa-13-3-470 ![]()
Generalizing, optimizing, and inventing numerical algorithms for thefractional Fourier, Fresnel, and linear canonical transforms Bryan M. Hennelly and John T. SheridanJOSA A, Vol. 22, Issue 5, pp. 917-927 doi:10.1364/JOSAA.22.000917 Forward References: n http://www.opticsinfobase.org/josaa/abstract.cfm?URI=josaa-22-5-917 ![]()
![]() Digital Holography, generalDigital recording and numerical reconstruction of hologramsUlf Schnars and Werner P O JuptnerMeasurement Science and Technology. Vol. 13, no. 9, pp. R85-R101. Sept. 2002 Forward References: n http://www.iop.org/EJ/article/0957-0233/13/9/201/e209r1.pdf?request-id=b3985 ![]()
Free-space beam propagation between arbitrarily oriented planes based onfull diffraction theory: a fast Fourier transform approach N. Delen and B. HookerJOSA A, Vol. 15, Issue 4, pp. 857-867 doi:10.1364/JOSAA.15.000857 Forward References: n http://www.opticsinfobase.org/abstract.cfm?URI=josaa-15-4-857 ![]()
Phase-shifting digital holographyIchirou Yamaguchi and Tong ZhangOptics Letters, Vol. 22, Issue 16, pp. 1268-1270 doi:10.1364/OL.22.001268 References: n link http://www.opticsinfobase.org/abstract.cfm?URI=ol-22-16-1268 ![]()
Frequency analysis of digital holographyThomas M. KreisOpt. Eng., Vol. 41, 771 (2002); doi:10.1117/1.1458551 Forward References: n http://spiedl.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=OPEGAR0000 ![]()
Literature, review, and overview papersDiffraction and Holography from a Signal Processing PerspectiveL. Onural and H. M. Ozaktas HOLOGRAPHY Conference, 2005 Forward References: nlink
Computer generated holograms: an historical reviewG. TricolesApplied Optics, Vol. 26, Issue 20, pp. 4351-4357 doi:10.1364/AO.26.004351 http://www.opticsinfobase.org/ao/abstract.cfm?uri=ao-26-20-4351 ![]()
Three-dimensional imaging and processing using computational holographicimaging Yann Frauel, Thomas J. Naughton, Osamu Matoba, Enrique Tajahuerce, and Bahram JavidiProceedings of the IEEE, March 2006, Volume: 94, Issue: 3, 636-653, ISSN: 0018-9219 http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=1605208 ![]()
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Applied Optics 2001 Forward References: 7 http://www.opticsinfobase.org/abstract.cfm?URI=ao-40-32-5943 ![]() | ||||||||
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> > | Email from Tom Grycewicz (Jan 17, 2008)Tom Grycewicz is currently at The Aerospace Corporation in the Sensor Engineering and Exploitation Dept. His work is in optical engineering with quite a bit of work on optical correlators and more generally, optical system modeling and design (image chain analysis), and pattern recognition. I had asked him what he thought were some significant and preferably recent contributions in Fourier optics applied to image processing. This is part of his email response.Here is the basic problem with image processing: in order to pass data through an optical processing system, the data first needs to be transferred to a spatial light modulator, and this bottleneck is about ten Mpixels per second. Reading the answer requires a camera--another ~ten Mpixel per second bottleneck. A good math coprocessor can handle a Mpixel FFT faster than the data transfer rate to or from the optical system. Add to this all of the advantages a programmable processor has over analog hardware for computing. Other Topic | |||||||
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SIMILAR PAPER: Optical image processing by matched amplificationTallis Chang, John Hong, Scott Campbell, Pochi YehOptics Letters 1992 Forward References: 0 http://www.opticsinfobase.org/abstract.cfm?URI=ol-17-23-1694 ![]()
Optical image encryption based on input plane and Fourier plane random encodingPhilippe Refregier, Bahram JavidiOptics Letters 1995 Forward References: 89 http://www.opticsinfobase.org/abstract.cfm?URI=ol-20-7-767 ![]()
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> > | Fractional derivatives - analysis and experimental implementationJeffrey Davis, David Smith, Dylan McNamara, Don Cottrell, Juan CamposApplied Optics 2001 Forward References: 7 http://www.opticsinfobase.org/abstract.cfm?URI=ao-40-32-5943 ![]()
Spatial amplification: an image processing technique using the selective amplification of spatial frequenciesTallis Chang, John Hong, Pochi YehOptics Letters 1990 Forward References: 1 http://www.opticsinfobase.org/abstract.cfm?URI=ol-15-13-743 ![]()
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> > | Paper SummariesFourier Optics Papers and OthersThese works are related to optical image processing using Fourier optics. This list was originally made for Gordon's contrast reduction project, so not all papers are Fourier optics papers. This list was made on January 17, 2008.Zernike Phase ContrastIt might be helpful to reference the original Zernike Phase Contrast method.* Zernike, F. "Diffraction theory of knife-edge test and its improved form, the phase-contrast method," Royal Astronomy Society Monthly Notices: 94, 377-384, 1934. All-optical spatial filtering with power-limiting materialsChandra Yelleswarapu, Pengfei Wu, Sri-Rajasekhar Kothapalli, D.V.G.L.N. Rao, Brian Kimball, S. Siva Sankara Sai, R. Gowrishankar, S. SivaramakrishnanOptics Express 2006 Forward References: 0 http://www.opticsinfobase.org/abstract.cfm?URI=oe-14-4-1451 ![]()
All-optical image processing by means of a photosensitive nonlinear liquid-crystal film: edge enhancement and image addition-subtractionM.Y. Shih, A. Shishido, I.C. KhooOptics Letters 2001 Forward References: 7 http://www.opticsinfobase.org/abstract.cfm?&id=64908 ![]()
SIMILAR PAPER: All-optical neural-net-like image processing with photosensitive nonlinear nematic filmI.C. Khoo, K. Chen, A. DiazOptics Letters 2003 Forward References: 0 http://www.opticsinfobase.org/abstract.cfm?id=78022 ![]()
All-optical image processing with a supranonlinear dye-doped liquid-crystal filmM.Y. Shih, A. Shishido, P.H. Chen, M.V. Wood, I.C. KhooOptics Letters 2000 Forward References: 3 http://www.opticsinfobase.org/abstract.cfm?&id=62054 ![]()
Programmable birefringent lenses with a liquid crystal displayJeffrey Davis, Garrett Evans, Karlton Crabtree, Ignacio MorenoApplied Optics 2004 Forward References: 0 http://www.opticsinfobase.org/abstract.cfm?URI=ao-43-34-6235 ![]()
Detail-Preserving Contrast Reduction For Still CamerasPrasanna Rangarajan, Panos PapamichalisIEEE Intl. Conf. on Img. Proc. 2006 http://ieeexplore.ieee.org/iel5/4106439/4106440/04107172.pdf?tp=&arnumber=4107172&isnumber=4106440 ![]()
Adaptive optics with advanced phase-contrast techniques. I. High-resolution wave-front sensing.Mikhail Vorontsov, Eric Justh, Leonid BeresnevJ. Opt. Soc. Am. A 2001 Forward References: 8 http://www.opticsinfobase.org/abstract.cfm?URI=josaa-18-6-1289 ![]()
SIMILAR PAPER: Adaptive optics with advanced phase-contrast techniques. II. High-resolution wave-front controlEric Justh, Mikhail Vorontsov, Gary Carhart, Leonid Beresnev, P.S. KrishnaprasadJ. Opt. Soc. Am. A 2001 Forward References: 7 http://www.opticsinfobase.org/abstract.cfm?id=64351 ![]()
Spatial phase-shift interferometry - a wavefront analysis technique for three-dimensional topometryShay Wolfling, Emmanuel Lanzmann, Moshe Israeli, Nissim Ben-Yosef, Yoel ArieliJ. Opt. Soc. Am. A 2005 Forward References: 1 http://www.opticsinfobase.org/abstract.cfm?URI=josaa-22-11-2498 ![]()
Medical image processing using transient Fourier holography in bacteriorhodopsin filmsSri-Rajasekhar Kothapalli, Pengfei Wu, Chandra Yelleswarapu, D.V.G.L.N RaoApplied Physics Letters 2004 http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=APPLAB000085000024005836000001&idtype=cvips&gifs=yes ![]()
Optical scatter imaging: subcellular morphometry in situ with Fourier filteringNada Boustany, Scot Kuo, Nitish ThakorOptics Letters 2001 Forward References: 8 http://www.opticsinfobase.org/abstract.cfm?URI=ol-26-14-1063 ![]()
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