Distinguished Lecturer: U. Waterloo

 

Talk: U. Rochester

 

Plenary Speaker: 7th International Conference on Unconventional Computation

 

Talk: U. Montreal

 

Talk: BIRS Workshop: The Biology-Combinatorics Interface

 

Keynote Speaker: Conference on Foundations of Nanoscience

 

Plenary Speaker: SIAM Discrete Mathematics Conference

 

Plenary Speaker: Computability in Europe Conference (CiE)

 

Talk: Langara College, Vancouver

 

Talk: Canadian Discrete and Algorithmic Mathematics Conference (CanaDAM), BIRS

 

Talk: Inverse Protein Folding Focussed Research Group, BIRS

 

Talk: RNA Workshop, Benasque, Spain;

 

Distinguished Lecturer: Duke University, April 2006

 

Plenary Speaker: Latin American Theoretical Informatics Symposium, Chile, March 2006

 

Talk: Polytechnic University of New York

 

Talk: Simon Fraser University

 

Talk: Linear Time Algorithm for Parsing RNA Secondary Structure.
5th Workshop on Algorithms in Bioinformatics - WABI 2005.
Mallorca, Spain, October 5, 2005 .

Talk: RNA Molecules: Glimpses through an Algorithmic Lens.
U. Saskatchewan, Nov 1, 2005.

Talk: Learning and Intelligent Optimization Workshop. Andalo, Italy, 2007.

 

Talk: Department of Electrical, Management and Mechanical Engineering /
Department of Mathematics and Computer Science, University of Udine (Italy), 2007

 

Talk: Dipertimento di Informatica e Telecommunicazione, University a degli Studi di Trento, Povo di Trento (Italy), 2007

 

Talk: School of Computing Science, Simon Fraser University (Canada), 2007

 

Talk: Institute de Recherche Interdisiplinaires et de D'eveloppements en Intelligence Artificielle (IRIDIA),
Universite Libre de Bruxelles (Belgium), 2007

 

Talk: Department of Computer Science, University of Bologna (Italy), 2007

 

Talk: RiboWest 2006 Conference, Prince George (BC)

 

Talk: Euro XVI Conference, Reykjavik (Iceland)

 

Talk: Microsoft Research, Cambridge (UK)

 

Talk: Microsoft Resarch / University of Trento Centre for Computational and Systems Biology, Povo di Trento (Italy)

 

Workshop: Local Search, University of Birmingham (UK).

 

Talk: Solving RNA and DNA Design Problems using Stochastic Local Search.

 

DIT seminar series. Trento, Italy. June 14, 2005.

 

• Cenk Sahinalp

 

Bioinformatics Seminar Series, Washington University in St Louis, MO, Dec 2006.

SIAM Conference on Discrete Mathematics (Computational Biology Session), Victoria, BC, Jun 2006.

Workshop: Schloss Dagstuhl, Workshop on Algorithmic Foundations of Pattern Discovery, Germany, May 2006.

Workshop: 3rd Annual Workshop on String Algorithms, Haifa, Israel, May 2006.

Dept. of Computer Science and DIMACS, Rutgers University, NJ, Feb 2006.

Division of Computational and Molecular Biology, USC, CA, Jan 2006.

Plenary talk: DLT 2005, 9th Intl. Conf. on Developments in Language Theory, Palermo, Italy, Jul 2005.

Workshop: Schloss Dagstuhl, Workshop on Sublinear Algorithms, Germany, May 2005.

Workshop: 2nd Annual Workshop on String Algorithms, Haifa, Israel, May 2005.

 

Talk:  RNA - RNA Interaction Prediction and Antisense RNA Target Search.
The Second Haifa Annual International Stringology, Haifa, Israel, 2005.

Workshop: Sublinear Algorithms. Schloss Dagstuhl, 2005.

Talk: Locally Consistent Parsing and Applications to Approximate String Comparisons.
DLT'05, Intl Conf on Developments in Language Theory, Palermo, Italy, 2005.

 

Keynote Lecture: 14th Int'l Conf. DNA Computing (DNA14), Prague, June 2-6, 2008.

 

Keynote Lecture:19th Int'l Conf on Genome Informatics (GIW2008). Brisbane, Australia, Dec. 1-3, 2008.

 

Distinguished Lecturer: Computer Science Department, University of Texas, Dallas, Sept 14, 2007.

 

Talk: Bioinformatics Lecture Series, Carnegie Mellon University. Oct 12, 2007.

 

Keynote Speaker: ISBRA 2007. Atlanta, May 7-10, 2007.

 

Keynote speaker: The 13th Annual International Computing and Combinatorics Conference (COCOON'07), July 16-19 2007, Banff, Alberta.

 

Invited Speaker: 11th Int'l Conf. Develop. Language Theory (DLT), Turku, July, 3-6, 2007.

 

Keynote speaker: Ohio Collaborative Conference on Bioinformatics, Miami University, Oxford Ohio, July 9-11, 2007.

 

Distinguished Speaker: Modern homology search, Distinguished Lecture Series, Simon Fraser University, Oct. 26, 2006.

 

Invited Speaker: Fast homology search.

31st Int'l Symp. on Math. Found. Comput. Sci. (MFCS'2006), Slovakia, Aug. 28--Sept. 1, 2006.

 

Distinguished Speaker: Workshop on Bioalgorithmics, July 12-15, 2006. Singapore.

 

Invited Speaker: Complexity of motif ranking 

2006 RECOMB Satellite Workshop on Regulatory Genomics, Singapore, July 17-18, 2006.

 

Invited Speaker: The information distance and applications.

The 11th International Conference on Implementation and Application of Automata (CIAA'06), Taipei, Taiwan, August 21-23, 2006.

 

Keynote Speaker: Information distance.

IEEE Int'l Conf. on Granular Computing, Atlanta, May 10-12, 2006.

Talk: Center for Integrative Bioinformatics, Vienna, Austria, 2007.

 

Talk: Ludwigs-Maximilians University & Technical University, Munich, Germany, 2007.

 

Talk: Renyi Institute of Mathematics, Budapest, Hungary, 2007.

 

Talk: Laboratory of Molecular Biology, Cambridge, UK, 2007.

 

Talk: Oxford Centre for Gene Function, University of Oxford, UK, 2007.

 

Talk: European Bioinformatics Institute, Cambridge, UK, 2007.

 

Talk: BC Cancer Agency, Vancouver, Canada, 2007.

 

Guest Lecturer: Advanced Course on RNA Computational Biology (EMBO workshop), Tuebingen, Germany, 2006.

 

Talk: The similarity metric and the distance metric.

Workshop on BioAlgorithmics, Institute for Mathematical Sciences, National University of Singapore, July 2006

 

Talk: An algorithm for detecting homologues of known structured RNAs in genomes.

CAIMS-MITACS 2006 Joint Annual Conference, Toronto, June 2006.

 

Talk: An algorithm for detecting homologues of known structured RNAs in genomes.

Chinese Academy of Science and Max Planck Society Partner Institute for Computational Biology, May 2006

 

Talk: Global and local alignment between RNA structures.

Special session on Algorithms and Bioinformatics, Third annual conference on theory and application of models of computation, May 2006