Figures from "Machine Learning: a Probabilistic Perspective"



Auto-generated by pmlFigureCodeReport.m on 16-Aug-2012 from book version of 16-Aug-2012

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Total number of figures: 463

You can also download a zip file of all the figures, where the files are named fig1.1a.pdf, etc. The figure numbers refer to the first printing of the book.

Figure Number Image Files Source Files
1.1 shapeClassification
designMatrixShapesColors
shapeClassification.ppt
designMatrixShapesColors.ppt
1.2 newsgroupsSpyWithLabels
newsgroupsVisualize.m
1.3 Iris-setosa
Iris-versicolor
Iris-virginica
Figures courtesy of Dennis Kramb and SIGNA
1.4 fisherIrisPairs
fisheririsDemo.m
1.5 mnistTestUnshuffled
mnistTestShuffled
shuffledDigitsDemo.m
1.6 murphyFamily
murphyFamilyFaceDetection
Figures courtesy of Bernard Diedrich of Sherwood Studios
1.7 polyfitDemo1
polyfitDemo2
linregPolyVsDegree.m
1.8 heightWeightScatterNoLabels
heightWeightKmeans2
kmeansHeightWeight.m
1.9 pca3dData
pca3dProj2d
pcaDemo3d.m
1.10 pcaImages-faces-images
pcaImages-faces-basis
pcaImageDemo.m
1.11 glassoSachs7B
ggmLassoDemo.m
1.12 felzenBPpenguinOccluded
felzenBPpenguinImputed
Figures courtesy of Pedro Felzenszwalb.
1.13 netflix
netflix.ppt
1.14 knnMatch
knnVoronoi
knnVoronoi.m
1.15 knnClassifyTrainData
knnClassifyProbC1K10
knnClassifyProbC2K10
knnClassifyPredK10
knnClassifyDemo.m
1.16 nestedCubes
curseDimensionality
curseDimensionality.m
1.17 gaussian1d
linregWedge2Wedge
gaussPlotDemo.m
linregWedgeDemo2.m
1.18 polyfitDemo14
polyfitDemo20
linregPolyVsDegree.m
1.19 sigmoidPlot
logregSATdemo
sigmoidPlot.m
logregSATdemo.m
1.20 knnClassifyPredK1
knnClassifyPredK5
knnClassifyDemo.m
1.21 knnClassifyErrVsK
kfold
knnClassifyDemo.m
 
2.1 unifHist
deltaHist
discreteProbDistFig.m
2.2 pxyGrid
pxyGrid
2.3 gaussianCDF
normalDistAlphaBlue
quantileDemo.m
2.4 binomDistPlot1
binomDistPlot4
binomDistPlot.m
2.5 alignedSequences
seqlogo
seqlogoDemo.m
2.6 poissonDemo2
poissonDemo3
poissonPlotDemo.m
2.7 studentLaplacePdf
studentLaplaceLogpdf
studentLaplacePdfPlot.m
2.8 robustDemoNoOutliers
robustDemoOutliers
robustDemo.m
2.9 gammaDistb1
rainfallDemo
gammaPlotDemo.m
gammaRainfallDemo.m
2.10 betadist
betaPlotDemo.m
2.11 pareto-pdf
pareto-log-pdf
paretoPlot.m
2.12 corrcoefWikipedia
 
2.13 gaussPlot2dDemoContourFull
gaussPlot2dDemoContourDiag
gaussPlot2dDemoContourSpherical
gaussPlot2dDemoSurfSpherical
gaussPlot2Ddemo.m
2.14 dirichlet
dirichlet2-2-2
dirichlet20-2-2
DirSimplex1
visDirichletGui.m
dirichlet3dPlot.m
2.15 dir01
dir1
dirichletHistogramDemo.m
2.16 polarToCartesian
polarToCartesian.ppt
2.17 cltBeta1
cltBeta5
centralLimitDemo.m
2.18 changeOfVars
changeOfVarsDemo1d.m
2.19 mc-pi
mcEstimatePi.m
2.20 mcAccuracyDemoHistgauss10
mcAccuracyDemoHistgauss100
mcAccuracyDemoKsdgauss10
mcAccuracyDemoKsdgauss100
mcAccuracyDemo.m
2.21 bernoulliEntropy
bernoulliEntropyFig.m
2.22 MICfig4
Figure courtesy of David Reshef and the American Association for the Advancement of Science
 
3.1 josh-5-5
Figure courtesy of Josh Tenenbaum
3.2 joshPriorLikPost16
numbersGame.m
3.3 joshPriorLikPostAll
numbersGame.m
3.4 joshPredictive16
numbersGame.m
3.5 josh-5-6
Figure courtesy of Josh Tenenbaum
3.6 betaPost
betaDemoPost
binomialBetaPosteriorDemo.m
3.7 BBpostpred
BBpluginpred
betaBinomPostPredDemo.m
3.8 naiveBayesBow1ClassCond
naiveBayesBow2ClassCond
naiveBayesBowDemo.m
 
4.1 gaussEvec
gaussEvec.ppt
4.2 heightWeightScatter
heightWeightScatterCov
gaussHeightWeight.m
4.3 dboundaries2classParabolic
dboundaries3classParabolic
discrimAnalysisDboundariesDemo.m
4.4 softmaxDemo2
softmaxDemo2.m
4.5 dboundaries2classLinear
dboundaries3classLinear
discrimAnalysisDboundariesDemo.m
4.6 ldaGeom
ldaGeom.ppt
4.7 shrunkenCentroidsErrVsLambda
shrunkenCentroidsSRBCTdemo.m
4.8 shrunkenCentroidsClass1
shrunkenCentroidsClass2
shrunkenCentroidsClass3
shrunkenCentroidsClass4
shrunkenCentroidsSRBCTdemo.m
4.9 gaussCondJoint
gaussCondMarg
gaussCondCond
gaussCondition2Ddemo2.m
4.10 gaussInterpDemo30
gaussInterpDemo0p1
gaussInterpDemo.m
4.11 gaussImputationLollipop2
gaussImputationDemo.m
4.12 gaussInferParamsMean1d
gaussInferParamsMean1d.m
4.13 gauss2dupdatePostSubplot
gaussInferParamsMean2d.m
4.14 demoGaussBayes2dEqualSpherical
demoGaussBayes2dUnequalSpherical
demoGaussBayes2dUnequal
sensorFusion2d.m
4.15 gaussInterpNoisyDemo30
gaussInterpNoisyDemo0p1
gaussInterpNoisyDemo.m
splineBasisDemo.m
4.16 WiDof3Ellipse
WiDof3Plot
wiPlotDemo.m
4.17 covshrinkDemo
shrinkcovDemo.m
4.18 sigmaPost
gaussSeqUpdateSigma1D.m
4.19 NIXdemoBone
NIXdemo2.m
4.20 sensorFusion2Gauss
sensorFusion2Nongauss
sensorFusionUnknownPrec.m
4.21 heightWeightWhiten
 
 
5.1 bimodalSpike
gammaDist1
bimodalDemo.m
gammaPlotDemo.m
5.2 bayesChangeOfVar
bayesChangeOfVar.m
5.3 betaCI
betaHPD
betaHPD.m
5.4 centralInterval
HPD
postDensityIntervals.m
5.5 amazonSellersTheta
amazonSellersDelta
amazonSellerDemo.m
5.6 BayesOccamsRazor
BayesOccamsRazor.ppt
5.7 linregEbModelSelVsN5D1EB
linregEbModelSelVsN5D2EB
linregEbModelSelVsN5D3EB
linregEbModelSelVsN5PostEB
linregEbModelSelVsN.m
5.8 linregEbModelSelVsN30D1EB
linregEbModelSelVsN30D2EB
linregEbModelSelVsN30D3EB
linregEbModelSelVsN30PostEB
linregEbModelSelVsN.m
5.9 joshCoins4LML
joshCoins4BIC
coinsModelSelDemo.m
5.10 mixBetaDemo
mixBetaDemo.m
5.11 cancerRatesEb
cancerRatesCredibleEb
cancerRatesEb.m
5.12 shrinkageDemoBaseballParams
shrinkageDemoBaseballHatched
shrinkageDemoBaseball.m
5.13 rejectOptionClassifier
rejectOptionClassifier.ppt
5.14 lossFnQ2
lossFnQ10
lossFnQ20
lossFunctionFig.m
5.15 ROChand
PRhand
PRhand.m
 
6.1 bootstrapDemoBer10
bootstrapDemoBer100
bootstrapDemoBer.m
6.2 minimaxRiskCurvesCody
minimaxRiskCurvesCody.tex
6.3 riskFnGaussN5
riskFnGaussN20
riskFnGauss.m
6.4 samplingDistGaussShrinkage
relMSEgaussShrinkage
samplingDistGaussShrinkage.m
6.5 biasVarModelComplexityV3
biasVarModelComplexity3.m
6.6 linregPolyVsRegTestErrN50
linregPolyVsRegCvN50
linregPolyVsRegDemo.m
6.7 hingeLoss
hingeLossPlot.m
 
7.1 surfaceLinear
surfaceQuad
surfaceFitDemo.m
7.2 linRegResiduals
linRegContoursSSE
residualsDemo.m
contoursSSEdemo.m
7.3 leastSquaresProj
leastSquaresProjection.m
7.4 convexSet
nonconvexSet
convexSet.ppt
nonconvexSet.ppt
7.5 convexFnHand1
convexFnHand3
convexFnHand.m
7.6 linregRobust
huberLoss
linregRobustDemoCombined.m
huberLossDemo.m
7.7 linregPolyVsRegFitK2N21
linregPolyVsRegFitK6N21
linregPolyVsRegDemo.m
7.8 linregPolyVsRegTestErrN21
linregPolyVsRegCvEvidence
linregPolyVsRegDemo.m
7.9 geomRidgeGray
geomRidge.m
7.10 polyfitN1
polyfitN2
polyfitN10
polyfitN25
linregPolyVsN.m
7.11 bayesLinRegPlot2dB
bayesLinRegDemo2d.m
7.12 linregPostPredPlugin
linregPostPredBayes
linregPostPredSamplesPlugin
linregPostPredSamples
linregPostPredDemo.m
7.13 linregPolyVsRegCvN21
linregPolyVsRegTestEbN21
linregPolyVsRegDemo.m
7.14 linregOnlineDemo
 
 
8.1 sigmoidPlot2Dcolor
sigmoidplot2D.m
8.2 aokiSteepest1
aokiSteepest6
steepestDescentDemo.m
8.3 aokiSteepestExact
linesearchPerp
steepestDescentDemo.m
8.4 newtonsMethodMinQuad
newtonsMethodNonConvex
newtonsMethodMinQuad.m
newtonsMethodNonConvex.m
8.5 logregLaplaceGirolamiData
logregLaplaceGirolamiNLL
logregLaplaceGirolamiPost
logregLaplaceGirolamiPostLaplace
logregLaplaceGirolamiDemo.m
8.6 logregLaplaceGirolamiPlugin
logregLaplaceGirolamiSamples
logregLaplaceGirolamiMc
logregLaplaceGirolamiModerated
logregLaplaceGirolamiDemo.m
8.7 logregSATdemoBayes
probitSigmoidPlot
logregSATdemoBayes.m
probitPlot.m
probitRegDemo.m
8.8 lmsTraj
lmsRssHist
LMSdemo.m
8.9 logregMultinom5classLinear
logregMultinom5classRbf
logregMultinomKernelDemo.m
8.10 genVsDiscrimClassCond
genVsDiscrimPost
generativeVsDiscrim.m
8.11 fisherLDAdemoData
fisherLDAdemoProjFisher
fisherLDAdemoProjPCA
fisherLDAdemo.m
8.12 fisherDiscrimVowelPCA
fisherDiscrimVowelLDA
fisherDiscrimVowelDemo.m
8.13 logregQ1b
logregQ.ppt
 
9.1 glm
glm.tex
9.2 dgmGLMM3
bone-density-mean-curves
Figures courtesy of Matt Wand
 
10.1 DAGfive
UGMfive
DAGfive.tex
UGMfive.tex
10.2 NBCsimple
TAN
NBCsimple.tex
TAN.tex
10.3 markovChain1xCropped
markovChain2
markovChain2.tex
10.4 ldsDGM
ldsDGM.tex
10.5 alarmNetwork
qmrvh
visualizeAlarmNetwork.m
10.6 DGMfamily
DGM2loci
DGMfamily.ppt
DGM2loci.ppt
10.7 platesIIDx
platesIIDx.tex
10.8 NBpartiallyUnrolled
NBtwoPlates
NBpartiallyUnrolled.tex
NBtwoPlates.tex
10.9 bball1
bball3
bball5
bball2
bball4
bball6
bball1.tex
bball3.tex
bball5.tex
bball2.tex
bball4.ppt
bball4.tex
bball6.tex
10.10 bballBoundary1
bballBoundary2
bballBoundary3
bballBoundary1.tex
bballBoundary2.tex
bballBoundary3.tex
10.11 DGMseven
DGMseven.tex
10.12 oilCatterId1
oilCatterId2
oilCatterId3
oilCatterId1.tex
oilCatterId2.tex
oilCatterId3.tex
10.13 pomdpDgm2
mdpDgm2
pomdpDgm2.tex
mdpDgm2.tex
10.14 BNfamily
bball1-ex
bball2-ex
BNfamily.ppt
bball1-ex.tex
bball2-ex.tex
10.15 weatherbn
fishnet
weatherbn.ppt
10.16 QMRbarrenNode1
QMRbarrenNode2
 
 
11.1 marg-hidden
marg-hidden
11.2 LVMzoo1
LVMzoo2
LVMzoo3
LVMzoo4
LVMzoo1.tex
LVMzoo2.tex
LVMzoo3.tex
LVMzoo4.tex
11.3 mixgauss3Components
mixgauss3SurfB
mixGaussPlotDemo.m
11.4 yeastTimeSeries
clusterYeastKmeansCentroids16
kmeansYeastDemo.m
11.5 mixBernoulliMnist10
mixBerMnistEM.m
11.6 mixexpExpertsFixmix0
mixexpGatingFixmix0
mixexpMeanVarFixmix0
mixexpDemo.m
11.7 mixexpDgm
hmixexpDgm
mixexpDgm.tex
hmixexpDgm.tex
11.8 mixexpOneManyFwds
mixexpOneManyExperts
mixexpOneManyMu
mixexpDemoOneToMany.m
11.9 mixModelDgm
mixModelDgmPlates
mixModelDgm.tex
mixModelDgmPlates.tex
11.10 gmmLikSurfaceHistSigma5
gmmLikSurfaceSurSigma5
mixGaussLikSurfaceDemo.m
11.11 gmmOldFaithfulDemo1
gmmOldFaithfulDemo2
gmmOldFaithfulDemo3
gmmOldFaithfulDemo4
gmmOldFaithfulDemo5
gmmOldFaithfulDemo6
mixGaussDemoFaithful.m
11.12 vqDemoClown2
vqDemoClown4
vqDemo.m
11.13 gmmSingularityB
mixGaussMLvsMAP
mixGaussSingularity.m
mixGaussMLvsMAP.m
11.14 robustMixGaussBankruptcy
robustMixStudentBankruptcy
mixStudentBankruptcyDemo.m
11.15 probitRegDemoNLL
probitRegDemo.m
11.16 emLogLikelihoodMax
emLogLikelihoodMax.m
11.17 wikipedia-graduated-optimization
wikipedia-graduated-optimization
11.18 varEMbound1
varEMbound2
varEMbound.m
11.19 gmmOverrelaxedK5trial1
gmmOverrelaxedK5trial2
mixGaussOverRelaxedEmDemo.m
11.20 kmeansModelSel1dMSE
kmeansModelSel1dNLL
kmeansModelSel1d.m
11.21 kmeansModelSel1dTrain
kmeansModelSel1dKmeans
kmeansModelSel1dGmm
kmeansModelSel1d.m
11.22 mvnImputeScatterTruth
mvnImputeScatterEm
gaussImputationDemo.m
11.23 scaleGMM
scaleGMM.tex
11.24 kmeansGrid
 
11.25 linregCensoredSchmeeHahn
linregCensoredSchmeeHahnDemo.m
 
12.1 PPCAsprayCan
PPCAsprayCan.ppt
12.2 faBiplotCarsNoRotationManualLabels
faBiplotDemo.m
12.3 mixFAdgm
mixFAdgm.tex
12.4 mixPpcaAnnulus1
mixPpcaAnnulus10
mixPpcaDemoNetlab.m
12.5 pcaDemo2
ppcaDemo2d
pcaDemo2d.m
ppcaDemo2d.m
12.6 pcaImages-mnist3-basis
pcaImages-mnist3-reconImages
pcaImageDemo.m
12.7 heightWeightPCA
heightWeightPCAstnd
pcaDemoHeightWeight.m
12.8 svdEcon
svdTrunc
svdEcon.tex
svdTrunc.tex
12.9 svdImageDemoClown200
svdImageDemoClown2
svdImageDemoClown5
svdImageDemoClown20
svdImageDemo.m
12.10 svdImageDemoClownSigmaScrambled
svdImageDemo.m
12.11 pcaEmStepByStepEstep1
pcaEmStepByStepMstep1
pcaEmStepByStepEstep2
pcaEmStepByStepMstep2
pcaEmStepByStep.m
12.12 embed_1
embed_4
embed_5
embed_2
embed_3
embed_6
Figures courtesy of Matt Beal.
12.13 embed_table
Figure courtesy of Matt Beal.
12.14 pcaOverfitReconTrain
pcaOverfitReconTest
pcaOverfitDemo.m
12.15 pcaOverfitNllTrain
pcaOverfitNllTest
pcaOverfitDemo.m
12.16 pcaOverfitScree
pcaOverfitProfile
pcaOverfitDemo.m
12.17 bleiLogisticNormal
Figure courtesy of David Blei.
12.18 binaryPCAinput
binaryPCAoutput
binaryFaDemoTipping.m
12.19 supervisedPcaDgm
plsDgm3
ccaDgm3
supervisedPcaDgm.tex
plsDgm3.tex
ccaDgm3.tex
12.20 icaTruth
icaObs
icaPca
icaIca
icaDemo.m
12.21 icaUniformSource
icaUniformMixed
icaUniformPCA
icaUniformICA
icaDemoUniform.m
12.22 supSuperGauss
supSuperGauss2d
supSuperLaplace2d
supSuperUnif2d
subSuperGaussPlot.m
12.23 ifaDgm
ifaDgm.tex
12.24 lsiLowD
lsiCode.m
 
13.1 graycodeModelsGray
graycodeLogpost
graycodePost
graycodeMarg
linregAllSubsetsGraycodeDemo.m
13.2 subsets-lattice
prostateSubsets
prostateSubsets.m
13.3 L2L1contours
L2L1contours.ppt
13.4 subgradient
subgradientPlot.m
13.5 softThresholding
hardThresholding
softThresholding.ppt
13.6 linregPolyLasso
linregL2PolyVsDegree-mse
linregPolyLassoDemo.m
linregPolyVsDegree.m
13.7 ridgePathDemoCv
lassoPathProstateCv
ridgePathProstate.m
lassoPathProstate.m
13.8 lassoPathProstateTauLars
lassoPathProstateLars
lassoPathProstate.m
13.9 sparseSensingDemo
sparseSensingDemo.m
13.10 lassoInconsistent
bolassoInconsistent
probCorrectSupportInconsistent
bolassoDemo.m
13.11 schmidtPG
Figure courtesy of Mark Schmidt.
13.12 lassoEMnoSigma
lassoEMnoSigma.tex
13.13 groupLassoGaussA
groupLassoGaussB
groupLassoDemo.m
13.14 groupLassoUnif2A
groupLassoUnif2B
 
13.15 groupLassoBayesNoSigma
groupLassoBayes.tex
groupLassoBayesNoSigma.tex
13.16 hoefling-fl-acgh
FLNoise
FLDenoised
Figures courtesy of Holger Hoefling
13.17 sparsePost
sparsePostPlot.m
13.18 HALfull
HALpenalty
normalGammaPenaltyPlotDemo.m
13.19 lassoThreshold
HALthreshold
normalGammaThresholdPlotDemo.m
13.20 sparseBayesEllipse
sparseBayesCircle
sparseBayesEllipse.tex
sparseBayesCircle.tex
13.21 icaBasisGen
sparseDictDemoSC
sparseDictDemoPCA
sparseDictDemoNMF
sparseDictDemoSPCA1
sparseDictDemoSPCA2
icaBasisDemo.m
sparseDictDemo.m
13.22 sparseSensing
sparseSensing.tex
13.23 inpaintA-noisy
inpaintA-restored
Figures courtesy of Julien Mairal.
13.24 ridgeLassoOLS
 
 
14.1 pmkPandas
Figure courtesy of Kristen Grauman
14.2 xorTable
logregXorPoly
logregXorRbfProto
logregXorDemo.m
14.3 rbfDemoALL
linregRbfDemo.m
14.4 kernelBinaryClassifDemologregL2
kernelBinaryClassifDemologregL1
kernelBinaryClassifDemoRVM
kernelBinaryClassifDemoSVM
kernelBinaryClassifDemo.m
14.5 kernelRegrDemoDatalinregL2
kernelRegrDemoDatalinregL1
kernelRegrDemoDataRVM
kernelRegrDemoDataSVM
kernelRegrDemo.m
14.6 kernelRegrDemoStemlinregL2
kernelRegrDemoStemlinregL1
kernelRegrDemoStemRVM
kernelRegrDemoStemSVM
kernelRegrDemo.m
14.7 kpcaScholkopfNoShade
kpcaScholkopf.m
14.8 kpcaDemo2Regular
kpcaDemo2Kernel
kpcaDemo2.m
14.9 gplvm-oil-pca
gplvm-oil-kpca
Figures courtesy of Neil Lawrence.
14.10 vapnikLoss
epsTube
huberLossDemo.m
14.11 largeMarginPrinciple2
 
14.12 geomLinDiscrim
softMargin
geomLinDiscrim.tex
softMargin.tex
14.13 tipping-logodds
Figure courtesy of Mike Tipping
14.14 oneVsRest
oneVsOne
oneVsRest.tex
oneVsOne.tex
14.15 svmCvSurf
svmCvGamma5
svmCgammaDemo.m
14.16 smoothingKernelPlot
smoothingKernelPlot.m
14.17 parzen-unif-1
parzen-unif-2
parzen-gauss-1
parzen-gauss-2
parzenWindowDemo2.m
14.18 kernelRegressionDemo
kernelRegressionDemo.m
 
15.1 GPGM
GPGM.tex
15.2 gprDemoNoiseFreePrior
gprDemoNoiseFreePost
gprDemoNoiseFree.m
15.3 gprDemoChangeHparams1
gprDemoChangeHparams2
gprDemoChangeHparams3
gprDemoChangeHparams.m
15.4 rasmussen5-1a
rasmussen5-1b
rasmussen5-1c
gprDemoArd.m
15.5 rasmussen5-5a
rasmussen5-5b
rasmussen5-5c
gprDemoMarglik.m
15.6 gp-grid-based-integration
gp-is-integration
gp-ccd-integration
Figures courtesy of Jarno Vanhatalo.
15.7 gpc2dInitParams
gpc2dLearnedParams
gpcDemo2d.m
15.8 gpSpatialDemoLaplaceMean
gpSpatialDemoLaplaceVar
gpSpatialDemoLaplace.m
15.9 gpnnCov
gpnnSamples
gpnnDemo.m
15.10 gplvm-oil-kpca
gplvm-oil-gplvm
Figures courtesy of Neil Lawrence.
 
16.1 regtree
regtreeSurfaceB
regtreeSurfaceDemo.m
16.2 dtree
dtree.tex
16.3 giniDemo
giniDemo.m
16.4 dtreeIrisData
dtreeDboundaryUnpruned
 
16.5 dtreeUnprunedTree
dtreeErrorVsDepth
dtreeDemoIris.m
16.6 dtreePrunedTree
dtreeDboundaryPruned
dtreeDemoIris.m
16.7 marsHinge
mars1d
mars2d
marsDemo.m
16.8 adaboostErrorTrace
boostingDemo.m
16.9 expLoss
hingeLossPlot.m
16.10 adaboostDemo1
adaboostDemo3
adaboostDemo120
boostingDemo.m
16.11 nnet
nnet.tex
16.12 simardConvNN
Figure courtesy of Mike O'Neill
16.13 elasticDistortionDigit1
elasticDistortionDigit3
elasticDistortionDigit4
elasticDistortionQuiver1
elasticDistortionQuiver3
elasticDistortionQuiver4
elasticDistortionsDemo.m
16.14 lenet5
Figure courtesy of Yann LeCun
16.15 lenet5Errors
Figure courtesy of Yann LeCun
16.16 tanhPlot
tanhPlot.m
16.17 mlpPriorsDemo1
mlpPriorsDemo2
mlpPriorsDemo3
mlpPriorsDemo4
mlpPriorsDemo5
mlpPriorsDemo.m
16.18 sparseNnet
sparseNnetData
sparseNnetDemo.m
16.19 demoEvidenceReg
mlpRegHmc
mlpRegEvidenceDemo.m
mlpRegHmcDemo.m
16.20 bart-partial-dependence
Figure courtesy of Hugh Chipman
16.21 bart-variable-importance
Figure courtesy of Hugh Chipman
 
17.1 MC2state
leftRightStateTrans
MC2state.tex
leftRightStateTrans.tex
17.2 uniBigram
ngramPlot.m
17.3 markovDirichlet
markovDirichlet.ppt
17.4 mcPeriodic
mc4state
mcPeriodic.tex
mc4state.tex
17.5 smallwebMoler
pagerankDemo.m
17.6 harvard500spy
harvard500pagerank
pagerankDemoPmtk.m
17.7 lillypad1
lillypad2
hmmLillypadDemo.m
17.8 durbinSequences
durbinStateTrans
Figures courtesy of Richard Durbin.
17.9 casino
casino.ppt
17.10 hmmCasinoFiltered
hmmCasinoSmoothed
hmmCasinoViterbi
casinoDemo.m
17.11 dbn-inference-problems
dbn-inference-problems
17.12 markovTrellis
markovTrellis.ppt
17.13 hmmPhone2
viterbi2
hmmPhone2
viterbi2
viterbi.ppt
hmmPhone2.ppt
viterbi2.ppt
17.14 hmmCounterQ
hmmCounter.tex
hmmCounterQ.tex
17.15 hmmSelfLoops
hmmSelfLoopDist
hmmSelfLoopDist.m
17.16 hhmmASR
 
17.17 hhmmDbn
hhmmDbn.tex
17.18 LDS-UZY
arhmmDGMnoPlates
buriedMarkovModelA
LDS-UZY.tex
arhmmDGMnoPlates.tex
buriedMarkovModelA.tex
17.19 fhmm3
chmm3
fhmm.tex
fhmm3.tex
chmm3.tex
17.20 batnet
Figure courtesy of Daphne Koller
 
18.1 kalmanTrackingTruth
kalmanTrackingFiltered
kalmanTrackingSmoothed
kalmanTrackingDemo.m
18.2 slamDgm
slamDgm.tex
18.3 koller-Box15A3
Figure courtesy of Daphne Koller
18.4 rlsDgm
linregOnlineDemoKalman
linregOnlineDemoKalman.m
18.5 ssmTimeSeriesLevel
timeSeriesLocalLevel
ssmTimeSeriesSimple.m
18.6 ssmTimeSeriesTrend
timeSeriesLocalTrend
ssmTimeSeriesSimple.m
18.7 choiARMA
Figure courtesy of Myung Choi
18.8 thrun3-4
Figure courtesy of Sebastian Thrun.
18.9 sigma-point-filters
Figure courtesy of Eric Wan.
18.10 ADFPUP
dynamicLogreg
ADFPUP.tex
dynamicLogreg.tex
18.11 SLDS-UZQY
sldsTree
slds.tex
SLDS-UZQY.tex
sldsTree.tex
18.12 GBP2
IMM
 
18.13 dataAssoc
dataAssoc.tex
18.14 koller-twotanks
twotank-dbn
Figures courtesy of Daphne Koller
 
19.1 2dgridDAGa
2dgridUGM
2dgridDAGa.tex
2dgridUGM.tex
19.2 DGMseven
UGMseven
DGMseven.tex
UGMseven.tex
19.3 markovProperties
markovProperties.tex
19.4 ancestralSeven
ancestralSevenMoralized
ancestralSeven.tex
ancestralSevenMoralized.tex
19.5 GMvenn
GMvenn
19.6 koller-3-10
Figure courtesy of Daphne Koller
19.7 hopfieldDemo
hopfieldDemo.m
19.8 sudderthPotts142
sudderthPotts144
sudderthPotts146
gibbsDemoIsing.m
19.9 chaingraphLatticeXY
gridMRF.ppt
chaingraphLatticeXY.tex
19.10 vectorAR2
Figure courtesy of Rainer Dahlhaus and Oxford University Press
19.11 choiBidirected
choiBidirectedW
Figures courtesy of Myung Choi
19.12 mln-smoking
Figure courtesy of Pedro Domingos.
19.13 gridSmall
gridSmallPL
gridSmall.tex
gridSmallPL.tex
19.14 hmmXY
memmXY
crfXY
hmmXY.tex
memmXY.tex
crfXY.tex
19.15 w51-b2
w51-r3
w51-a4
w51-c5
w51-e6
Figures courtesy of Ben Taskar
19.16 crfBIO
Figure courtesy of Daphne Koller
19.17 crfSkip
Figure courtesy of Daphne Koller
19.18 altun06-cfg
Figure courtesy of Yasemin Altun
19.19 altun06-class-taxonomy
Figure courtesy of Yasemin Altun
19.20 sudderthStereo
Figure courtesy of Erik Sudderth.
19.21 altun06-cutting-plane
Figure courtesy of Yasemin Altun
 
20.1 bptreeUp2
bptreeDown2
bptreeUp2.tex
bptreeDown2.tex
20.2 hmmTwoSliceMsg
hmmTwoSlice.ppt
hmmTwoSliceMsg.tex
20.3 student-inf
student-MN
student-inf.tex
student-MN.tex
20.4 VE-student-steps-a
VE-student-steps-b
VE-student-steps-c
VE-student-steps-a.tex
VE-student-steps-b.tex
VE-student-steps-c.tex
20.5 treeMsgPassing
treeMsgPassing.ppt
20.6 pentagon
pentagonTriangulated
pentagon
pentagonTriangulated
20.7 koller-9-11
Figure courtesy of Daphne Koller
20.8 jtreeHMM2
jtreeHMM2.tex
20.9 koller-9-1
Figure courtesy of Daphne Koller
20.10 inheritedDisease
inheritedDisease.ppt
inheritedDisease.tex
 
21.1 KLfwd
KLreverse1
KLreverse2
KLfwdReverseMixGauss.m
21.2 KLqpGauss
KLpqGauss
KLpqGauss.m
21.3 isingImageDenoiseMeanfieldH1
isingImageDenoiseMeanfieldH3
isingImageDenoiseMeanfieldHMean
isingImageDenoiseDemo.m
21.4 fhmm3XY
fhmmFactored
fhmmChains
fhmm3.tex
fhmm3XY.tex
fhmmFactored.tex
fhmmChains.tex
21.5 unigaussVbDemo1
unigaussVbDemo2
unigaussVbDemo3
unigaussVbDemo4
unigaussVbDemo.m
21.6 linregEbModelSelVsN5PostVB
linregEbModelSelVsN5PostEB
linregEbModelSelVsN30PostVB
linregEbModelSelVsN30PostEB
linregEbModelSelVsN.m
21.7 mixGaussVbFaithfulObjVsIter
mixGaussVbDemoFaithful.m
21.8 mixGaussVbFaithful1
mixGaussVbFaithful94
mixGaussVbDemoFaithful.m
21.9 mixGaussVbFaithfulAlphas1
mixGaussVbFaithfulAlphas94
mixGaussVbDemoFaithful.m
21.10 sigmoidBoundB
sigmoidBoundJJ
sigmoidLowerBounds.m
 
22.1 monster2-9
Figure courtesy of Martin Wainwright.
22.2 MRF1234
fgraph-1234-maxCliques2
fgraph-1234-edges2
MRF1234.ppt
MRF1234.tex
fgraph-1234-maxCliques2.tex
fgraph-1234-edges2.tex
22.3 bntofg1
bntofg2
bntofg1.tex
bntofg2.tex
22.4 frey01-fig6
Figure courtesy of Brendan Frey
22.5 koller-Box11C
Figure courtesy of Daphne Koller
22.6 monster8-2
Figure courtesy of Martin Wainwright.
22.7 monster3-6
monster5-4
monster4-2
Figures courtesy of Martin Wainwright.
22.8 monster4-1
Figure courtesy of Martin Wainwright.
22.9 monster4-5
Figure courtesy of Martin Wainwright.
22.10 monster7-1
Figure courtesy of Martin Wainwright.
22.11 trueskillDgmDynamic
trueskillFg
 
22.12 PsiWin
LambdaWin
trueskillPlot.m
22.13 trueskillDemoDag
trueskillDemo
trueskillDemo.m
22.14 koller-13-5
Figure courtesy of Daphne Koller.
22.15 boykov01-alphaBetaSwap
Figure courtesy of Ramin Zabih
22.16 koller-Box13B
Figure courtesy of Daphne Koller
22.17 boykov01-stereo
Figure courtesy of Ramin Zabih
22.18 sontag-1-2a
sontag-1-3
Figures courtesy of David Sontag.
22.19 sontag-1-2b
Figure courtesy of David Sontag.
 
23.1 sampleCdf
sampleCdf.m
23.2 rejectionSampling
rejectionSamplingDemo
rejectionSamplingDemo.m
23.3 arsEnvelope
arsDemoTruth
arsDemoSamples
arsEnvelope.m
arsDemo.m
23.4 pf
pf
23.5 thrun8-7
Figure courtesy of Sebastian Thrun.
23.6 frame1
frame251
frame283
frame297
frame301
frame316
pfColorTrackerDemo.m
23.7 rbpfManeuverData
rbpfManeuverPfTrace
rbpfManeuverRbpfTrace
rbpfManeuverDemo.m
23.8 rbpfManeuverBelZ
rbpfManeuverBelX1
rbpfManeuverDemo.m
 
24.1 isingImageDenoiseGibbs1
isingImageDenoiseGibbs5
isingImageDenoiseGibbsMean
isingImageDenoiseDemo.m
24.2 gmmDgmUnrolled
gmmDgmCollapsed
gmmDgmCollapsed.tex
gmmDgmUnrolled.tex
24.3 sudderth-gibbsFiniteComparePath
sudderth-gibbsFiniteCompareQuant
Figures courtesy of Erik Sudderth
24.4 multilevelLinRegOLS
multilevelLinRegSlopeVsN
multilevelLinRegPred
multilevelLinregDemo.m
24.5 multilevelLinreg
multilevelLinreg.tex
24.6 gibbsGaussDemo
gibbsGaussDemo.m
24.7 mcmcGmmDemoSigma1-3d
mcmcGmmDemoSigma500-3d
mcmcGmmDemoSigma8-3d
mcmcGmmDemo.m
24.8 logregSatMhDemoPostBoth
logregSatMhDemoPost0
logregSatMhDemoPost1
logregSatMhDemo.m
24.9 randomWalk10
randomWalk17
randomWalk0to20Demo.m
24.10 sudderthPotts200
sudderthPotts10k
Figures courtesy of Erik Sudderth.
24.11 koller-12-6
Figure courtesy of Daphne Koller
24.12 mcmcGmmDemoSigma1-traceplot
mcmcGmmDemoSigma8-traceplot
mcmcGmmDemoSigma500-traceplot
mcmcGmmDemoSigma0-traceplot
mcmcGmmDemo.m
24.13 mcmcGmmDemoSigma1-acf
mcmcGmmDemoSigma8-acf
mcmcGmmDemoSigma500-acf
mcmcGmmDemoSigma0-acf
mcmcGmmDemo.m
24.14 sliceSampling
sliceSamplingDemo1d
sliceSamplingDemo1d.m
24.15 sliceSamplingDemo2dGrid
sliceSampling2dHist
sliceSamplingDemo2d.m
24.16 swendsenWang
Figure courtesy of Kevin Tang
24.17 SApeaksSurf2
SApeaksSurf3
saDemoPeaks.m
24.18 SApeaksTemp
SApeaksEnergy
saDemoPeaks.m
24.19 SApeaksSamples2
SApeaksSamples3
saDemoPeaks.m
 
25.1 clusterPurity
clusterPurity.ppt
25.2 sudderth-finiteMixIndGraph
sudderth-finiteMixDistGraphExampleData
Figures courtesy of Erik Sudderth
25.3 dpmSampleSeed2N50
dpmSampleSeed2N500
dpmSampleSeed2N1000
dpmSampleSeed3N50
dpmSampleSeed3N500
dpmSampleSeed3N1000
dpmSampleDemo.m
25.4 sudderth-DPpartitionBase
sudderth-DPpartitionA
sudderth-DPpartitionB
Figures courtesy of Erik Sudderth
25.5 stickbreak
stickBreakingDemo
stickBreakingDemo.m
25.6 sudderth-infiniteMixIndGraph
sudderth-infiniteMixDistGraphExampleData
Figures courtesy of Erik Sudderth
25.7 dpmGauss2dSeed2Iter50
dpmGauss2dSeed2Iter100
dpmGauss2dSeed2Iter200
dpmGauss2dSeed2PostK
dpmGauss2dDemo.m
25.8 sudderth-gibbsInfiniteComparePath
sudderth-gibbsInfiniteCompareQuant
Figures courtesy of Erik Sudderth
25.9 affpropFG
Figure courtesy of Brendan Frey
25.10 affpropFrey1
Figure courtesy of Brendan Frey
25.11 spiral-kmeans
spiral-spectral
spectralClusteringDemo.m
25.12 agglomDemoData
agglomDemoDendrogram
agglomDemo.m
25.13 yeastClustergram
yeastClustergram16
hclustYeastDemo.m
25.14 agglomNearest
agglomFurthest
agglomAvg
 
25.15 clusterYeastSingleLink
clusterYeastCompleteLink
clusterYeastAvgLink
hclustYeastDemo.m
25.16 heller-news4ave
heller-news4bhc
Figures courtesy of Katherine Heller.
25.17 heller-tree-bhc
heller-tree-atc
Figures courtesy of Katherine Heller.
25.18 IRManimals
Figure courtesy of Charles Kemp
25.19 crosscatFig7
Figure courtesy of Vikash Mansingkha
 
26.1 relnetSchmidtHcropped2
relevanceNetworkNewsgroupDemo.m
26.2 DAGpruneNews
Figure courtesy of Mark Schmidt
26.3 trees1
trees2
trees3
trees.tex
trees1.tex
trees2.tex
trees3.tex
26.4 tree_news
chowliuTreeDemo.m
26.5 markovEquivEx
markovEquivEx.tex
26.6 pdag
pdag.tex
26.7 heckermanSSnoHidden
Figure courtesy of David Heckerman
26.8 DAGsearchNews
Figure courtesy of Mark Schmidt
26.9 heckermanSShidden
Figure courtesy of David Heckerman.
26.10 hierTreesRcrop
Figure courtesy of Stefan Harmeling
26.11 choiTreeR2
Figure courtesy of Jin Choi
26.12 rephil
Figure courtesy of Brian Milch
26.13 structEqnModel
structEqnModel.tex
26.14 idealIntervention
idealIntervention.tex
26.15 simpsonsParadoxGraph
simpsonsParadoxGraph.m
26.16 simpsonsParadox1
simpsonsParadox2
simpsonsParadox1.tex
simpsonsParadox2.tex
26.17 sachsDiscreteDataBW
sachsBNinterventionNodes
 
26.18 glassoSachs36
glassoSachs27
glassoSachs7
glassoSachs0
ggmLassoDemo.m
26.19 news256
Figure courtesy of Mark Schmidt
26.20 sprinkler
sprinkler
 
27.1 catPCA
mPCA
catPCA.tex
mPCA.tex
27.2 GAP
LDAqPlates
GAP.tex
LDAqPlates.tex
27.3 steyvers-LDAsimplex
Figure courtesy of Tom Griffiths
27.4 steyvers-playTopics
Figure courtesy of Tom Griffiths
27.5 steyvers-playDoc
Figure courtesy of Tom Griffiths
27.6 bleiLDAperplexityPlot
bleiLDAperplexityPlot.m
27.7 LDAunrolledQ
LDAcollapsed
LDAcollapsed.tex
LDAunrolledQ.tex
27.8 steyvers-LDAgibbs-init
steyvers-LDAgibbs-final
Figures courtesy of Tom Griffiths
27.9 onlineVBLDA
Figure courtesy of David Blei.
27.10 bleiScienceCTM
Figure courtesy of David Blei
27.11 dynamicTopicModel
dynamicTopicModel.tex
27.12 bleiDTMneuro
Figure courtesy of David Blei
27.13 LDAHMM
LDAHMM.tex
27.14 blei-syntax-fig4
Figure courtesy of Tom Griffiths
27.15 SLDA
discLDA
SLDA.tex
discLDA.tex
27.16 MRLDA
CRFLDA
DMRLDA
MRLDA.tex
CRFLDA.tex
DMRLDA.tex
27.17 probNN1
probNN2
probNN1.tex
probNN2.tex
27.18 SBM1
SBM2
SBM1.tex
SBM2.tex
27.19 IRMgraphInputKemp
IRM1b
Figures courtesy of Charles Kemp
27.20 IRMsamples
Figure courtesy of Charles Kemp
27.21 SBMDGM
MMBMDGM
SBMDGM.tex
MMBMDGM.tex
27.22 edoMonksAdjmat
edoMonksSimplex
Figures courtesy of Edo Airoldi
27.23 RTMDGM
RTMDGM.tex
27.24 relationalData2
 
27.25 ontologyUMLS
Figure courtesy of Charles Kemp
27.26 IRMpolitical
Figure courtesy of Charles Kemp
27.27 cfIRHMgraph
Figure courtesy of Zhao Xu
27.28 PMFDGM
netflix2dB
Figures courtesy of Yehuda Koren
27.29 pmf-results-fig2a
netflixResultsWL
netflixResultsPlot.m
27.30 boltzmann
RBM
boltzmann.tex
RBM.tex
27.31 CDfigCropped
CDfigCropped
27.32 repsoftTab
 
27.33 repsoftLDA
Figure courtesy of Ruslan Salakhutdinov
 
28.1 deepDGM
deepBM
deepBelNet
deepDGM.tex
deepBM.tex
deepBelNet.tex
28.2 rbm3
rbm5
rbm6
Figures courtesy of Ruslan Salakhutdinov
28.3 russ-thesis-3-4
Figure courtesy of Ruslan Salakhutdinov
28.4 hinton-mnistnet
hinton-testerrs125
Figures courtesy of Geoff Hinton
28.5 russ-2dLSA
russ-2dauto
Figures courtesy of Ruslan Salakhutdinov
28.6 russ-pr
Figure courtesy of Ruslan Salakhutdinov
28.7 crbmSmall
crbmSmall.tex
28.8 spatialCRBMsimple
Figure courtesy of Bo Chen.
28.9 caltech_bases_4class_v2
caltech_bases_4class_v3
Figures courtesy of Honglak Lee.